MCAW (Multiple Carbohydrate Alignment with Weights)
Home
Help
Feedback
To use CFG array data,
this tool
may be useful!
Data set name
Enter the glycan structures in KCF format:
ENTRY G04845 Glycan COMPOSITION (Gal)3 (Glc)1 (GlcNAc)2 (LFuc)2 (Neu5Ac)1 MASS 1656.5 DBLINKS CCSD: 23949 GlycomeDB: 20420 JCGGDB: JCGG-STR011245 NODE 9 1 Glc 0 0 2 Gal -10 0 3 GlcNAc -20 10 4 GlcNAc -20 -10 5 Gal -30 15 6 LFuc -30 5 7 LFuc -30 -5 8 Gal -30 -15 9 Neu5Ac -40 15 EDGE 8 1 2:b1 1:4 2 3:b1 2:6 3 4:b1 2:3 4 5:b1 3:4 5 6:a1 3:3 6 7:a1 4:4 7 8:b1 4:3 8 9:a2 5:3 /// ENTRY G05108 Glycan COMPOSITION (Gal)2 (GalNAc)1 (GlcNAc)1 (LFuc)1 (Neu5Ac)1 (S)1 MASS 1266.2 CLASS Glycoprotein; O-Glycan DBLINKS CCSD: 33353 GlycomeDB: 20590 JCGGDB: JCGG-STR011425 NODE 7 1 GalNAc 20 1 2 Gal 10 1 3 GlcNAc 0 1 4 S -5 5 5 Gal -10 1 6 LFuc -10 -4 7 Neu5Ac -20 1 EDGE 6 1 2:b1 1:3 2 3:b1 2:3 3 4 3:6 4 5:b1 3:4 5 6:a1 3:3 6 7:a2 5:3 /// ENTRY G05121 Glycan COMPOSITION (Gal)2 (GalNAc)1 (GlcNAc)1 (LFuc)1 (Neu5Ac)2 MASS 1477.3 CLASS Glycoprotein; O-Glycan DBLINKS CCSD: 33350 GlycomeDB: 20599 JCGGDB: JCGG-STR011433 NODE 7 1 GalNAc 0 0 2 Neu5Ac -10 5 3 Gal -10 -5 4 GlcNAc -20 -5 5 Gal -30 0 6 LFuc -30 -10 7 Neu5Ac -40 0 EDGE 6 1 2:a2 1:6 2 3:b1 1:3 3 4:b1 3:3 4 5:b1 4:4 5 6:a1 4:3 6 7:a2 5:3 /// ENTRY G04183 Glycan COMPOSITION (Gal)3 (GlcNAc)5 (LFuc)1 (Man)3 (Neu5Ac)3 MASS 3026.8 CLASS Glycoprotein; N-Glycan DBLINKS CCSD: 41981 GlycomeDB: 19974 JCGGDB: JCGG-STR010756 NODE 15 1 GlcNAc 0 0 2 GlcNAc -10 0 3 Man -20 0 4 Man -30 10 5 Man -30 -10 6 GlcNAc -40 10 7 GlcNAc -40 -5 8 GlcNAc -40 -15 9 Gal -50 10 10 Gal -50 0 11 LFuc -50 -10 12 Gal -50 -15 13 Neu5Ac -60 10 14 Neu5Ac -60 0 15 Neu5Ac -60 -15 EDGE 14 1 2:b1 1:4 2 3:b1 2:4 3 4:a1 3:6 4 5:a1 3:3 5 6:b1 4:2 6 7:b1 5:4 7 8:b1 5:2 8 9:b1 6:4 9 10:b1 7:4 10 11:a1 7:3 11 12:b1 8:4 12 13:a2 9:6 13 14:a2 10:3 14 15:a2 12:6 /// ENTRY G04329 Glycan COMPOSITION (Gal)3 (GlcNAc)3 (LFuc)3 (Neu5Ac)1 MASS 1843.7 DBLINKS CCSD: 36620 GlycomeDB: 20084 JCGGDB: JCGG-STR010874 NODE 10 1 GlcNAc 27 -5 2 Gal 18 0 3 LFuc 18 -10 4 GlcNAc 9 0 5 Gal 0 5 6 LFuc 0 -5 7 GlcNAc -9 5 8 Gal -18 10 9 LFuc -18 0 10 Neu5Ac -27 10 EDGE 9 1 2:b1 1:4 2 3:a1 1:3 3 4:b1 2:3 4 5:b1 4:4 5 6:a1 4:3 6 7:b1 5:3 7 8:b1 7:4 8 9:a1 7:3 9 10:a2 8:3 /// ENTRY G04804 Glycan COMPOSITION (Gal)3 (GlcNAc)5 (LFuc)1 (Man)3 (Neu5Ac)3 MASS 3026.8 CLASS Glycoprotein; N-Glycan REFERENCE 1 [PMID:6704968] Chandrasekaran EV, Davila M, Nixon D, Mendicino J. Structures of the oligosaccharide chains of two forms of alpha 1-acid glycoprotein purified from liver metastases of lung, colon, and breast tumors. Cancer. Res. 44 (1984) 1557-67. DBLINKS CCSD: 8168 GlycomeDB: 33225 JCGGDB: JCGG-STR024138 NODE 15 1 GlcNAc 27.2 1.6 2 GlcNAc 17.2 1.6 3 Man 8.2 1.6 4 Man 0.2 7.6 5 Man 0.2 -4.4 6 GlcNAc -8.8 7.6 7 GlcNAc -8.8 -0.4 8 GlcNAc -8.8 -8.4 9 Gal -17.8 7.6 10 Gal -17.8 3.6 11 LFuc -17.8 -4.4 12 Gal -17.8 -8.4 13 Neu5Ac -26.8 7.6 14 Neu5Ac -26.8 3.6 15 Neu5Ac -26.8 -8.4 EDGE 14 1 2:b1 1:4 2 3:b1 2:4 3 4:a1 3:6 4 5:a1 3:3 5 6:b1 4:2 6 7:b1 5:4 7 8:b1 5:2 8 9:b1 6:4 9 10:b1 7:4 10 11:a1 7:3 11 12:b1 8:4 12 13:a2 9:3 13 14:a2 10:3 14 15:a2 12:6 ///
Or load KCF from a file:
Advanced weighting options
Gap penalty:
Monosaccharide:
-
Linkage information
-
Anomer:
Non reducing side carbon number:
Reducing side carbon number: