Invited Talks/Oral Presentations/Tutorials
2019
Oral presentations
Kiyoko F. Aoki-Kinoshita, Yu Watanabe, Shujiro Okuda.
Release of a glycomics and glycoproteomics mass spectrometry repository GlycoPOST.
4th Mass Spectrometry Informatics Workshop (JSBi), Tokyo, March 19, 2019.
Invited talks
Kiyoko F. Aoki-Kinoshita. Omics Data Integration Efforts Leading to Applications in Medicine, Energy, Nutrition and the Environment. Gordon Glycobiology Research Conference, Lucca (Barga), Italy, March 10-15, 2019.
2018
Oral presentations
Kiyoko F. Aoki-Kinoshita. Glycoscience Portal: GlyCosmos. The 41st Annual Meeting of the Molecular Biology Society of Japan, Yokohama, November 28-30, 2018.
Kiyoko F. Aoki-Kinoshita. Semantic Web Technologies and the GlyCosmos Portal. 10th ACGG Conference, Tainan, Taiwan, November 18-21, 2018.
Kiyoko F. Aoki-Kinoshita. Integration of International Life Science Databases through the Glycoscience Portal GlyCosmos. The 37th Annual Meeting of the Japanese Society for Carbohydrate Research, Sendai, August 28-30, 2018.
Invited talks
Kiyoko F. Aoki-Kinoshita. Glycoinformatics research aiming to understand glycan function: from databases to simulation. 16th JCGG Symposium, Tokyo, November 26-27, 2018.
Kiyoko F. Aoki-Kinoshita. GlyCosmos Portal. Glyco-Bioinformatics satellite meeting of the Society for Glycobiology, New Orleans, LA, USA, November 5, 2018.
Kiyoko F. Aoki-Kinoshita, Masaaki Shiota, Shinichiro Tsuchiya, Tamiko Ono, Sunmyoung Lee, Thukaa Kuoka, Nobuaki Miura, Aiko Hiraki, Daisuke Shinmachi, Nobuyuki P. Aoki, Jin-Dong Kim, Yu Watanabe, Shujiro Okuda, Yoshinori Suzuki, Noriaki Fujita, Kiyohiko Angata, Hisashi Narimatsu, Issaku Yamada. Integration of Life Science Data through Glycomics using Semantic Web Technologies. 2nd GlycoCom and 1st Human Glycome Project Meeting, Dubrovnik, Croatia, October 3-6, 2018.
Kiyoko F. Aoki-Kinoshita. Towards a Collaborative Global Glycoinformatics Community: GlyCosmos. 7th Charles Warren Workshop, Boston, MA, USA, August 15-18, 2018.
Kiyoko F. Aoki-Kinoshita. Software for handling the WURCS glycan representation. International Symposium on Chemistry and Materials Sciences 2018, Tokyo, August 23-24, 2018.
Kiyoko F. Aoki-Kinoshita. Integration of Omics Data through GlyCosmos. 29th International Carbohydrate Symposium, Lisbon, Portugal, July 14-19, 2018.
2017
Oral presentations
Kiyoko F. Aoki-Kinoshita. Going beyond GlyTouCan to integrate OMICS research The 9th ACGG Conference, Hong Kong, December 17-20, 2017.
Kiyoko F. Aoki-Kinoshita. Development of the Glycoscience Portal GlyCosmos to Connect Diverse Omics Fields. Symposium of Database Togo (Integration) 2017, Tokyo, October 4-5, 2017.
Kiyoko F. Aoki-Kinoshita. GlyTouCan and GlyCosmos Portal. Consortium of Biological Sciences 2017, Kobe, December 6-9, 2017.
Invited talks
Kiyoko F. AOKI-KINOSHITA, Nobuyuki P. AOKI, Daisuke SHINMACHI, Masaaki SHIOTA, Jin-Dong KIM, Shujiro OKUDA, and Issaku YAMADA. GlyTouCan and Beyond: Towards truly integrating omics research. 2017 Society for Glycobiology Annual Meeting. Glyco-Bioinformatics satellite meeting. Portland, WA, USA. November, 2017.
Kiyoko F. Aoki-Kinoshita. Glycoinformatics Research to Understand the Glycome. 6th International Conference for Young Chemists (ICYC), Penang, Malaysia, August 16-18, 2017.
Kiyoko F. Aoki-Kinoshita. Simulation Analysis of N-glycan Biosynthesis in Neurospora. Beilstein Glyco-bioinformatics Symposium 2017, Berlin, Germany, June 13-15, 2017.
Kiyoko F. Aoki-Kinoshita, Nobuyuki P. Aoki, Akihiro Fujita, Noriaki Fujita, Masaaki Matsubara, Shujiro Okuda, Toshihide Shikanai, Daisuke Shinmachi, Elena Solovieva, Yoshinori Suzuki, Shinichiro Tsuchiya, Issaku Yamada, Hisashi Narimatsu. Data integration and enrichment using Semantic Web technologies in GlyTouCan. 10th International Biocuration Conference, Stanford, CA, USA, March 26-29, 2017.
Nobuyuki P. Aoki, Daisuke Shinmachi, Yuki Ushioda, Shinichi Higashimoto, Shoko Nishihara, Yushi Takahashi, Kiyoko F. Aoki-Kinoshita. Analyzing glycans and glycogenes with web resources: RINGS, FlyGlycoDB and GlyTouCan. Gordon Glycobiology Conference, Ventura, CA, USA, March 19-24, 2017.
2016
Oral presentations
Kiyoko F. Aoki-Kinoshita. GlyTouCan version Toco: Integration Glycan-related Databases using Semantic Web Technologies. The 8th ACGG Conference, Wuxi, China, October 13-16, 2016.
Kiyoko F. Aoki-Kinoshita. Toco, the new version of the international glycan structure repository GlyTouCan. The 35th Japanese Carbohydrate Symposium, Kochi, September 1 - 3, 2016.
Kiyoko F. Aoki-Kinoshita, Nobuyuki P. Aoki, Akihiro Fujita, Noriaki Fujita, Masaaki Matsubara, Shujiro Okuda, Toshihide Shikanai, Daisuke Shinmachi, Elena Solovieva, Yoshinori Suzuki, Shinichiro Tsuchiya, Issaku Yamada, Hisashi Narimatsu. Semantic Web Technologies for Integrating Glycan-related Databases. 6th Warren Workshop 2016, Sapporo, August 24-26, 2016.
2015
Oral presentations
Kiyoko F. Aoki-Kinoshita. Proposed standard format for reporting glycomics MS experiments based on HUPO-PSI. The 34th Japanese Carbohydrate Symposium, C2-06, Tokyo, July 31 - August 2, 2015.
Invited/Keynote lectures
Kiyoko F. Aoki-Kinoshita. Latest Development in Semantic Web Technologies Applied to Glycosciences. Beilstein Glyco-bioinformatics Symposium 2015, Potsdam, Germany, June 22-26, 2015.
Kiyoko F. Aoki-Kinoshita. Utilizing the semantic WEB in GlyTouCan. 23rd International Symposium on Glycoconjugates, Split, Croatia, September 15-20, 2015.
2014
Oral presentations
Kiyoko F. Aoki-Kinoshita, Issaku Yamada, Akihiro Fujita, Shinichiro Tsuchiya, Daisuke Shinmachi, Nobuyuki P. Aoki, Masaaki Matsubara, Noriaki Fujita, Yoshinori Suzuki, Elena Solovieva、Toshihide Shikanai, Shujiro Okuda, Toshisuke Kawasaki and Hisashi Narimatsu. Development of an International Glycan Structure Repository. B7-05, The 33rd Japanese Carbohydrate Symposium, Nagoya, August 10-12, 2014.
Invited Talks
Kiyoko Aoki-Kinoshita, Nobuyuki P. Aoki, Daisuke Shinmachi, Akihiro Fujita, Shinichiro Tsuchiya, Noriaki Fujita, Masaaki Matsubara, Shujiro Okuda, Sena Arpinar, René Ranzinger, Toshihide Shikanai, Elena Solovieva, Yoshinori Suzuki, Toshisuke Kawasaki, Issaku Yamada, Hisashi Narimatsu. The GlyTouCan International Glycan Structure Repository. The 6th ACGG Conference, University of Hyderabad, India, December 9-12, 2014.
Aoki-Kinoshita KF. "Development of an International Glycan Structure Repository" Joint Meeting of the Society for Glycobiology and the Japanese Society of Carbohydrate Research. Honolulu, Hawaii, November 16-19, 2014.
Aoki-Kinoshita KF. "Collaborative Development of an International Glycan Structure Repository", 5th Charles Warren Workshop, National University of Ireland, Galway, Ireland, August 6-9, 2014.
Kiyoko F. Aoki-Kinoshita, Daisuke Shinmachi, Akihiro Fujita, Shinichiro Tsuchiya, Noriaki Fujita, Yoshinori Suzuki, Elena Solovieva, Masaaki Matsubara, Issaku Yamada, Toshihide Shikanai, Shujiro Okuda, Toshisuke Kawasaki, Hisashi Narimatsu. Development of JCGGDB and an International Glycan Structure Repository. JHUPO, Tsukuba, Japan, July 17-18, 2014.
2013
Invited Talks
Aoki-Kinoshita KF. "Semantic Web technologies applied to glycoscience data to integrate with life science databases", 3rd Beilstein Symposium on Glyco-Bioinformatics, Potsdam, Germany, June 10-14, 2013.
Aoki-Kinoshita KF. "Informatics Tools for Glycoscience Research", 22nd International Symposium on Glycoconjugates (GLYCO22), Dalian, China, June 23-28, 2013.
2012
Invited Talks
Aoki-Kinoshita KF. "Development of a GAG Database: Issues and Considerations", 4th Charles Warren Workshop, CCRC, University of Georgia, Athens, GA, USA, August 8-11, 2012.
Aoki-Kinoshita KF. "Glycoinformatics techniques for understanding carbohydrate function", National Tsing-Hua University, Hsinchu, Taiwan, March 30, 2012.
2011
Invited Talks
Aoki-Kinoshita KF. "Methods and applications of glycome informatics" The 71st Okazaki Conference on New Perspectives on Molecular Science of Glycoconjugates, Okazaki, Japan, October 12-14, 2011.
Aoki-Kinoshita KF. "Mining meaningful glycan structures from CFG resources" CFG Participating Investigators Meeting, NIH campus, Bethesda, MD, USA, July 27-29, 2011.
Aoki-Kinoshita KF, Ichimiya T, Takase-Yoden S, Nishihara S. "Identifying key glycan components in influenza virus infection using glycan structure mining techniques" 2nd Beilstein Symposium on Glyco-Bioinformatics, Potsdam, Germany, June 27-July 1, 2011.
2010
Tutorials
Aoki-Kinoshita KF. "Bioinformatics Approaches in Glycomics Research: An Introduction" IEEE International Conference on Bioinformatics & Biomedicine (BIBM), Hong Kong, December 18-21, 2010.
Invited Talks
Aoki-Kinoshita KF. "Data Standardization for Glyco-informatics" Biocuration 2010, Odaiba, Tokyo, Japan, October 11-14, 2010.
Aoki-Kinoshita KF. "Mining Glycan Array Data: Methods and Tools" CFG Workshop on Glycan Array / Bioinformatics, Atlanta, GA, USA, September 19-23, 2010.
Aoki-Kinoshita KF. "Glyco-database Development for Glycome Informatics Research" Charles Warren Workshop III, University of Gothenburg, Sweden, August 27-30, 2010.
2009
Invited Talks
Aoki-Kinoshita KF. "Recent development in mining algorithms for glycan data structures" CFG Workshop on Analytic and Bioinformatic Glycomics, NIH campus, Bethesda, MD, USA, April 16-18, 2009.
2007
Tutorial
Aoki-Kinoshita KF. and von der Lieth, C.-W. "An introduction to bioinformatics for glycomics research" 15th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 6th European Conference on Computational Biology (ECCB), Vienna, Austria, July 21-25, 2007.
